FastQCFastQC Report
週三 1 5月 2024
N.rna.R1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameN.rna.R1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17889547
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG288260.16113320253441857No Hit
GGTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGC237820.1329379665119525No Hit
GGATGACATAACTATTAGTGGCAGGTTAGTTGTTTGTAGGGCTCATGGTA236270.13207153875947783No Hit
GTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGATTTTTTAGGTA220110.1230383307078709No Hit
GTTTGGTTTAGACGTCCGGGAATTGCATCTGTTTTTAAGCCTAATGTGGG205870.1150783750980391No Hit
GGGGGAAGGCGCTTTGTGAAGTAGGCCTTATTTCTCTTGTCCTTTCGTAC192980.10787305011133039No Hit
GTTAGAGAAATGAATGAGCCTACAGATGATAGGATGTTTCATGTGGTGTA190700.10659856283672248No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)