NARWHAL

NARWHAL — Neoantigens Recognition Website and HLA Genotyping Tool

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HLA Genotyping

Basic Information

please provide your basic information.

Please re-enter your Email for comfirmation.

Step 1. Input data type selection

In this step, please choose the input data type as either DNA-seq or RNA-seq. Please select only one of them, as the prediction models will be different for each.

Step 2. Reads Upload

Select a method for uploading files:

Please upload your DNA-seq or RNA-seq files R1 and R2 here. Only allow .fastq.gz format. Maximum size for each file: 20 GB. Please note that uploading your files may take some time, so please refrain from refreshing the page while the data is being uploaded.

Start upload

Please provide the Google Drive file IDs (e.g., https://drive.google.com/file/d/Google Drive file ID /view) of your sequencing files in R1 and R2 fields. Using a share link from Google Drive is available. Only allow .fastq/.fq and .gz format.

Confirm URLs

Step 3. HLA genotyping

In this step, we provide arcasHLA to perform genotyping for HLA class I and class II genes from RNA sequencing.

Step 4. Privacy Statement

NARWHAL NEVER shares users' uploaded data and results with others. All data and metadata of one task will be removed automatically from the server without any copies after 7 days of the report generated. To comply with ethical data handling principles, we strongly recommend that users obtain explicit patient consent prior to uploading any personal or genomic data to the platform. If such consent cannot be secured, users are advised to run the pipeline via a locally installed version to maintain full data control.

Step 5. Data submission